Developers · Findings

Findings

Findings are structured objects, not log lines. Every one carries an explanation, quantitative evidence, and a machine-actionable remediation.

Findings

{"rule_id": "GM-DE-CONFOUND-004",
 "rule_version": "1.2.0", "status": "failed",
 "severity": "blocking",
 "evidence": [{"cramers_v": 0.87, "threshold": 0.40}],
 "remediation": {"action": "add_covariate",
                 "covariate": "batch"}}

MCP surface — assurance only

MCP tools

list_analysis_types
get_analysis_schema
list_assurance_profiles
validate_analysis_spec
submit_analysis · get_result
get_assurance_findings
get_evidence · verify_evidence
replay_evidence
get_sap · validate_against_sap

Deliberately narrow. Genomarker’s job is to assure computation — agents can gather scientific context elsewhere.

Actor provenance

Actor provenance JSON

{
  "actor_type": "agent",
  "interface": "mcp",
  "client": "helix-sci-agent",
  "model": "optional-identifier"
}

Findings.

MCP surface — assurance only

Actor provenance

Findings